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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015921408.1_cds_XP_016470369.1_62826
CDS Infomation

[gene=LOC107792649] [db_xref=GeneID:107792649] [protein=E3 ubiquitin-protein ligase SGR9, amyloplastic-like] [protein_id=XP_016470369.1] [location=complement(join(4182..4504,4849..4991,5580..5971))] [gbkey=CDS]
Sequence

ATGAAAGATCAAAGACACTTAGAATCCATAATCATGTCTACACTTTCCACCTTTACTCCG
CCTCAACTCTCCGATCTAACACATTACTTCTCCGCCCTCTACCACCGCCATCACCGACGT
ATTTTCTCTCTCCTCTCTTCTCCCACCCTCTTTTCTCTCACCTTACACCACCTCCACTCC
CTCTCCTTACACAACAAGTCTCTCCTTATAGCCAAACACCTATTGTCCAAACTTGCAATA
TTCACTCATTTCATGCACAATAACACAATCTTGCCACCACCCTCCACCACCTCTATGAAA
CTCTGCGATTTAGACGCCGTCCTCCTCCTCCTCCTGCTCTGTGAACTCCGCCAACATGAT
CCAGAAGCAGTACTCGATCTCCCTCCATCCAGGTGGCGCCTTATTCTTTGTCAATACATT
GCCAAAGACGCGCTAAAATTTTCTACCATTAGGGGCTCTAACAGAGAAGTTATAATGAAG
TTCATTGAGATGGTGGCAAAATGCAAGAACTTTATCAATGCCATGAATCATACAGATAGT
AGTGGAGGAAAAAATAGGAAGGAAGTGGCGACATCAGTGGCGGTAGTGGTGGCGCTGCCG
TCAGTGGAAGTGAGTGGCGGCGGAGGGGGAGAGTGTGTTATATGCAAAGAAGAGATGAAA
GAAGGAAGAGATGTTTGTAAATTGCCATGTCATCATTTGTTTCATTGGATATGTATTTTG
CCTTGGTTGAAAACGAGGAACACATGTCCATGTTGCCGGTTTCAGCTACCGTCCGATGAT
GTTTTCGCCGAGATCCGACGGTTGTGGGAGGTTGTTGTCAAGACAAGTGCTAGTGCAAAG
TTTGTAGGAGTTGATTAA

Peptide Sequence

PEP ID

XP_016470369.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase SGR9, amyloplastic-like [Nicotiana tabacum]
Sequence

MKDQRHLESIIMSTLSTFTPPQLSDLTHYFSALYHRHHRRIFSLLSSPTLFSLTLHHLHS
LSLHNKSLLIAKHLLSKLAIFTHFMHNNTILPPPSTTSMKLCDLDAVLLLLLLCELRQHD
PEAVLDLPPSRWRLILCQYIAKDALKFSTIRGSNREVIMKFIEMVAKCKNFINAMNHTDS
SGGKNRKEVATSVAVVVALPSVEVSGGGGGECVICKEEMKEGRDVCKLPCHHLFHWICIL
PWLKTRNTCPCCRFQLPSDDVFAEIRRLWEVVVKTSASAKFVGVD

Transcript Sequence

Gene sequence data has not been registered.